Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCGTATAAGATTCCGTGGTTGGGCCCAGAGCCTGTCGAGGGTGCCAGTT
.((((((((((((((((((...&.))))))).......))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153708
GeneSymbolRTP1
Binding site812,863
Score0.846
Seed1
Au0.382
Energy-26.3
Binding len28
Me-3.793
Phylopstem0.3748496153846154
Phylopflank0.9239965749999998
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure