Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTGGAGACTGCGCTGCC
..(((((.((((((....(((&))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153708
GeneSymbolRTP1
Binding site44,64
Score1.0
Seed0
Au0.412
Energy-20.0
Binding len20
Me-8.239
Phylopstem1.856725
Phylopflank1.2843397950000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure