Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAACCCAGGAGTCAGAGTCACTGTCAGAGGAGCTGCAGA
((((((((.(((((((..(((&))))))))).......................).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153710
GeneSymbolSTKLD1
Binding site1434,1477
Score0.846
Seed1
Au0.412
Energy-20.0
Binding len43
Me-4.994
Phylopstem1.3564375000000002
Phylopflank0.44142938000000004
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end6
PositionCDS
2D Structure