Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAAAGGGGCCGTGG
(((.((((((((..(((((...&)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153711
GeneSymbolCALHM5
Binding site2969,2986
Score0.846
Seed0
Au0.397
Energy-24.3
Binding len17
Me-9.116
Phylopstem-0.28302125
Phylopflank-0.08828832212500004
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure