Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGCTCCATGCCCGGCTGCAGC
(((((((((.(((((((((((&))))))....)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153712
GeneSymbolTTL
Binding site1660,1686
Score0.846
Seed1
Au0.382
Energy-22.8
Binding len26
Me-5.18
Phylopstem2.3442730750000003
Phylopflank0.11623165000000005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure