Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCTTCTGTGGCTGCT
..((((((((((..(..((((&))))..)..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153712
GeneSymbolTTL
Binding site5649,5669
Score1.0
Seed1
Au0.515
Energy-22.5
Binding len20
Me-7.336
Phylopstem0.04554175
Phylopflank-0.03342329750000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure