Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATTCATATGCACTCTCATAGTACCTACATGCAAGCAAGGGGCCACATTGTGA
((((((((((((.(((((((..&.))))).......)).)))))))))....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153716
GeneSymbolHSFY2
Binding site1009,1063
Score0.923
Seed1
Au0.603
Energy-20.4
Binding len33
Me-5.227
Phylopstem0.10867306500000003
Phylopflank0.25951931775
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure