Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACGATCGCTGATAGATCAGCTGCC
..((((((((((((((.((((&)))))))))))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153716
GeneSymbolHSFY2
Binding site1232,1260
Score1.0
Seed1
Au0.485
Energy-23.0
Binding len28
Me-4.957
Phylopstem0.7614740869565217
Phylopflank0.6033236933750001
Longest consecutive pairings12
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure