Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAACCTCAGTTGGAC
.(.((((((.(((((.(((((&)))))))))).)))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153716
GeneSymbolHSFY2
Binding site938,958
Score0.923
Seed0
Au0.544
Energy-22.0
Binding len20
Me-6.826
Phylopstem-0.29391283333333335
Phylopflank0.004164564000000023
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure