Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCGCCCAGCTGTT
..(((((((.(((.((((((.&)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153717
GeneSymbolEVC
Binding site5945,5963
Score0.846
Seed1
Au0.338
Energy-24.7
Binding len18
Me-7.056
Phylopstem-0.5058598571428572
Phylopflank-0.5102987037500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure