Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATACAGCAGCTGCCGTGACCGCTCCACCTGGCCCTGGCGCAGCTGCAGG
(((((((((((.(.((.((((&.)))).))...).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153718
GeneSymbolNUP62
Binding site1166,1218
Score0.846
Seed1
Au0.265
Energy-26.3
Binding len25
Me-8.141
Phylopstem-0.4232774545454545
Phylopflank-0.2417647725
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure