Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATACAGCAGCTGCCGTGACCGCTCCACCTGGCCCTGGCGCAGCTGCAGG
(((((((((((.(.((.((((&.)))).))...).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153719
GeneSymbolNUP62
Binding site1321,1373
Score0.846
Seed1
Au0.265
Energy-26.3
Binding len25
Me-8.141
Phylopstem0.08727431818181819
Phylopflank-0.44910220124999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure