Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAATGGCAGTTGCC
..((((((((.(((.(.....&).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153742
GeneSymbolCTH
Binding site832,847
Score0.846
Seed1
Au0.559
Energy-17.5
Binding len15
Me-8.517
Phylopstem5.884102374999999
Phylopflank4.26382600125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure