Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTATAAAAGAACTGCGGCTGGAAC
((.((((((((((((((((.(&).)))))).....)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153748
GeneSymbolKCNC2
Binding site2524,2551
Score0.923
Seed0
Au0.515
Energy-21.0
Binding len27
Me-5.495
Phylopstem4.088295933333334
Phylopflank2.74276784875
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure