Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTGAAAGTCCCACTGGCTGG
...(((((((((((((((((.&)))))))))))..........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153758
GeneSymbolIL19
Binding site1086,1114
Score0.923
Seed0
Au0.441
Energy-20.4
Binding len28
Me-6.515
Phylopstem-0.5417874851851854
Phylopflank0.06228406625000002
Longest consecutive pairings11
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure