Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGGCCGGGCGCGGTGG
(((((((.((..(((((((...&)))))))..)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349130
GeneSymbolB3GALNT1
Binding site388,408
Score0.846
Seed1
Au0.426
Energy-20.4
Binding len20
Me-12.423
Phylopstem0.19414282857142856
Phylopflank-0.02647137250000005
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure