Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTTGGATATTTCCACTGCCACTCCAGAAAAACAGATGTGCCAGGG
.(((((((((...(((......&.)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153809
GeneSymbolTAF1L
Binding site5163,5210
Score0.923
Seed1
Au0.471
Energy-18.1
Binding len16
Me-11.254
Phylopstem3.333309477777778
Phylopflank2.83360439375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure