Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTAATGCCGTAGTGTGCAC
.((((((((((((...(((((&)))))....)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153810
GeneSymbolCACUL1
Binding site10543,10566
Score1.0
Seed1
Au0.5
Energy-22.2
Binding len23
Me-5.619
Phylopstem2.0887446153846154
Phylopflank1.3015501550000002
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure