Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCTGAAAAGAGGACACACTGGAGCTGCAGA
((((((((.(((((((((((.&))))............))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153810
GeneSymbolCACUL1
Binding site1339,1373
Score0.923
Seed1
Au0.456
Energy-21.3
Binding len34
Me-4.994
Phylopstem-0.041204791666666636
Phylopflank-0.08542906875000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure