Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATTCAGAATATTGGAGCTATGTC
.(((((((((.((((((((...&))))))))....))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153811
GeneSymbolSLC38A6
Binding site420,443
Score0.846
Seed1
Au0.676
Energy-17.4
Binding len23
Me-6.618
Phylopstem5.003515999999999
Phylopflank3.0524725575000002
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure