Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCT
..(((((((((((.((((((.&.)))))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153811
GeneSymbolSLC38A6
Binding site249,291
Score0.923
Seed1
Au0.529
Energy-22.5
Binding len21
Me-5.814
Phylopstem3.399286516666667
Phylopflank4.18648743
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure