Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCCGAGTGTAAAGTCTTGCTGCTCTGTTGCCCAGGCTGGAGTACAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349137
GeneSymbolB3GALNT1
Binding site483,536
Score0.846
Seed1
Au0.441
Energy-28.9
Binding len24
Me-10.109
Phylopstem-0.27888682727272723
Phylopflank0.12822165624999998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure