Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGCTGTGCTGGGA
.(((((((((...(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_156039
GeneSymbolCSF3R
Binding site1328,1345
Score0.846
Seed1
Au0.338
Energy-18.0
Binding len17
Me-11.254
Phylopstem2.151103
Phylopflank1.314013905
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure