Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACAACCAGCAGCCTCATCTGCC
..((((((((((((((.((((&)))).)))))).)))))......))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_156039
GeneSymbolCSF3R
Binding site984,1011
Score0.923
Seed1
Au0.397
Energy-22.8
Binding len27
Me-4.957
Phylopstem0.6109524714285713
Phylopflank1.1453492150000002
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure