Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGAAAGGGCTGCTGGAGAGCCAGA
..(((((((((((((((((...&)))))))))))..........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170600
GeneSymbolSH2D3C
Binding site544,572
Score0.846
Seed1
Au0.412
Energy-24.4
Binding len28
Me-4.957
Phylopstem4.574215644444444
Phylopflank2.98889113
Longest consecutive pairings11
Position of longest consecutive pairings17
Pairings in 3prime end5
PositionCDS
2D Structure