Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCCATCCGCAGCTGTG
..((((((((((.((......&.)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170600
GeneSymbolSH2D3C
Binding site1201,1219
Score0.846
Seed1
Au0.309
Energy-21.9
Binding len15
Me-6.479
Phylopstem5.428124000000001
Phylopflank3.6766326174999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure