Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTACACTGCCAGTTGTAT
.(((((((((((.((((((((&))))..)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349139
GeneSymbolB3GALNT1
Binding site3445,3468
Score0.923
Seed1
Au0.618
Energy-19.5
Binding len23
Me-5.082
Phylopstem-0.29842226666666666
Phylopflank-0.20389518762500006
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure