Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCTCGCTGCTTTCACAGCTGCAAC
(((((((((((((.(..((((&))))..)..)))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170665
GeneSymbolATP2A2
Binding site7186,7215
Score0.846
Seed1
Au0.471
Energy-21.6
Binding len29
Me-5.027
Phylopstem-0.012677957894736887
Phylopflank0.04243001750000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure