Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGCTGGAGTGCAGTGA
((((((((((..((((((....&))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170679
GeneSymbolSKP1
Binding site4862,4882
Score0.923
Seed1
Au0.412
Energy-24.9
Binding len20
Me-10.109
Phylopstem0.48633594545454545
Phylopflank0.057297036499999995
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end4
Position3UTR
2D Structure