Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGACTGGAATGCAGTGG
(((((..(((..(((((((...&)))))))..)))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170679
GeneSymbolSKP1
Binding site3894,3915
Score0.846
Seed0
Au0.412
Energy-23.7
Binding len21
Me-13.554
Phylopstem-0.36050471428571434
Phylopflank0.09520315249999997
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure