Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACCAGGGTCTGCTTGGGTGGGCAGCTGTT
..((((((((((((((.....&)))))).................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170679
GeneSymbolSKP1
Binding site7613,7645
Score0.885
Seed1
Au0.485
Energy-19.0
Binding len32
Me-4.957
Phylopstem-0.048528356129032266
Phylopflank0.08056294624999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure