Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAAGACCTGGAAAGGAGCCCAGC
..(((((((((((((((((...&.))))))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170686
GeneSymbolZNF398
Binding site2415,2444
Score1.0
Seed1
Au0.603
Energy-28.2
Binding len20
Me-4.957
Phylopstem0.40577719444444443
Phylopflank0.10015807125000001
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure