Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTTCAGAAAGTGCCAGTGA
(((((((..((((((((((...&))).))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170686
GeneSymbolZNF398
Binding site3212,3232
Score1.0
Seed1
Au0.544
Energy-23.7
Binding len20
Me-7.308
Phylopstem0.24054545454545453
Phylopflank0.130831405
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure