Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCATGAAAAACCCAGACTGGAGACTGGA
..((((((((..(((((((...&.)))))))..)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349143
GeneSymbolB3GALNT1
Binding site1888,1917
Score0.923
Seed1
Au0.574
Energy-23.2
Binding len20
Me-11.129
Phylopstem1.2288333666666666
Phylopflank1.2274764187499996
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure