Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAACCATGGAATCCCTAAATGGTGGCAAACCATTCCTGCAAG
(((((((((.((((((((((.&)))))))))).)))..........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170696
GeneSymbolALDH1A2
Binding site417,464
Score1.0
Seed1
Au0.529
Energy-18.8
Binding len47
Me-5.18
Phylopstem0.5561707300000001
Phylopflank0.8223611524999997
Longest consecutive pairings10
Position of longest consecutive pairings37
Pairings in 3prime end7
PositionCDS
2D Structure