Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTGAACCTCTACACCAATAACTGCTGCAGGTGTGAT
(((((.(((((((((((((((&.)))).)))).........))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170697
GeneSymbolALDH1A2
Binding site2325,2366
Score0.846
Seed0
Au0.574
Energy-20.9
Binding len33
Me-5.839
Phylopstem4.551538784
Phylopflank4.419358452500001
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure