Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGACTGGAGACTGGA
..((((((((..(((((((...&)))))))..)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349145
GeneSymbolB3GALNT1
Binding site2237,2256
Score0.846
Seed1
Au0.574
Energy-22.9
Binding len19
Me-11.129
Phylopstem2.233305477777778
Phylopflank1.8718995037500001
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure