Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCGGAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCGGC
((((((((((((((((.....&.))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170712
GeneSymbolRASSF1
Binding site624,668
Score0.846
Seed1
Au0.324
Energy-24.0
Binding len21
Me-3.938
Phylopstem0.6750237368421054
Phylopflank0.4849570925
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure