Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGGCTCGCGTGCTTCTGAGCTGCT
..(((((((((((((.(((((&))))))))).))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349145
GeneSymbolB3GALNT1
Binding site1081,1110
Score0.846
Seed1
Au0.412
Energy-21.2
Binding len29
Me-5.19
Phylopstem0.5168179565217391
Phylopflank0.5057980637500001
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end7
Position5UTR
2D Structure