Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCACCTGTGGGTGTAGCCAGGTA
(((((((.((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_170714
GeneSymbolRASSF1
Binding site1225,1250
Score0.923
Seed1
Au0.412
Energy-16.7
Binding len13
Me-9.366
Phylopstem0.8103808571428572
Phylopflank3.5715629736249994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure