Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCGGAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCGGC
((((((((((((((((.....&.))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170714
GeneSymbolRASSF1
Binding site807,851
Score1.0
Seed1
Au0.324
Energy-24.0
Binding len21
Me-3.938
Phylopstem2.710909947368421
Phylopflank1.82464696125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure