Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATGGCCGTGGCTA
....((((((((((((.((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170721
GeneSymbolMSI2
Binding site689,706
Score0.846
Seed0
Au0.426
Energy-20.4
Binding len17
Me-9.547
Phylopstem4.65832
Phylopflank5.1235565649999995
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure