Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGTTGGGGCTGTGGA
.....(((((((((((((...&)))..)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_170723
GeneSymbolCDY1
Binding site36,52
Score0.846
Seed0
Au0.5
Energy-20.2
Binding len16
Me-13.666
Phylopstem-0.24599066666666658
Phylopflank-0.14936460576923077
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure