Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCACCTGACAGCC
.....(((((((.(((((((.&))))))).))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170723
GeneSymbolCDY1
Binding site748,765
Score0.846
Seed0
Au0.574
Energy-18.9
Binding len17
Me-14.955
Phylopstem1.271962857142857
Phylopflank1.6560023675
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure