Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGAATAGCGCTGCTGCAGA
(((((((.(((.(....((((&)).))....).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170723
GeneSymbolCDY1
Binding site1283,1306
Score0.923
Seed1
Au0.544
Energy-18.2
Binding len23
Me-11.423
Phylopstem1.6587646142857142
Phylopflank2.66461871
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure