Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGACTGGAGACTGGA
..((((((((..(((((((...&)))))))..)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349146
GeneSymbolB3GALNT1
Binding site1993,2012
Score0.923
Seed1
Au0.574
Energy-22.9
Binding len19
Me-11.129
Phylopstem2.952722888888889
Phylopflank2.26588192
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure