Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTCCCCCGGCTGCC
..(((((((.((..((((((.&))))))..)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170724
GeneSymbolPKHD1
Binding site2048,2067
Score0.923
Seed1
Au0.412
Energy-24.1
Binding len19
Me-8.345
Phylopstem-0.35037277142857143
Phylopflank2.2293406975
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure