Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGCAGTGGCCCAGATCTCAGGAGCTGCAAA
((((((((((.((((((((((&))))).))))).))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170724
GeneSymbolPKHD1
Binding site5274,5309
Score0.923
Seed1
Au0.559
Energy-20.6
Binding len35
Me-6.762
Phylopstem1.276744909090909
Phylopflank2.63995239375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure