Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGGAGGATAATGACGACCTGGAGCTGCAGC
((((((((.(((((((.....&.)))))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170725
GeneSymbolPGBD2
Binding site410,444
Score0.923
Seed1
Au0.412
Energy-22.7
Binding len19
Me-4.994
Phylopstem1.1285315
Phylopflank0.5240257975
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure