Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATGCATGGCAGCTGCAT
.(((((((((.(.((((..((&))..))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170725
GeneSymbolPGBD2
Binding site1641,1661
Score1.0
Seed1
Au0.471
Energy-22.2
Binding len20
Me-7.907
Phylopstem1.750952711111111
Phylopflank0.9412346276249999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure